Nextflow Modules
Showing module(s) with keyword "mapper"
| Module | Keywords | Description |
|---|---|---|
| nf-core/mapad/map | mapad ancient dna adna damage deamination miscoding lesions c to t palaeogenomics archaeogenomics palaeogenetics archaeogenetics short-read align aligner alignment map mapper mapping reference fasta fastq bam cram | Map short-reads to an indexed reference genome |
| nf-core/mashmap | mapper aligner minhash kmer | Mashmap is an approximate long read or contig mapper based on Jaccard similarity |
| nf-core/mirdeep2/mapper | mirdeep2 mapper RNA sequencing | miRDeep2 Mapper is a tool that prepares deep sequencing reads for downstream miRNA detection by collapsing reads, mapping them to a genome, and outputting the required files for miRNA discovery. |