Nextflow Modules
Showing module(s) with keyword "parallel"
| Module | Keywords | Description |
|---|---|---|
| nf-core/bio2zarr/vcfpartition | vcf bcf partition regions parallel genomics | Outputs a set of region strings that partition indexed VCF/BCF files for parallel processing. |
| nf-core/ltrfinder | genomics annotation parallel repeat long terminal retrotransposon retrotransposon | Finds full-length LTR retrotranspsons in genome sequences using the parallel version of LTR_Finder |
| nf-core/picard/splitsambynumberofreads | split parallel bam subset downsample sam cram | Splits a SAM/BAM/CRAM file to multiple files. This tool splits the input query-grouped SAM/BAM/CRAM file into multiple files while maintaining the sort order. This can be used to split a large unmapped input in order to parallelize alignment. |