Nextflow Modules
Showing module(s) with keyword "de novo assembly"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/maxbin2 | Process | metagenomics assembly binning maxbin2 de novo assembly mags metagenome-assembled genomes contigs | MaxBin is a software that is capable of clustering metagenomic contigs |
| nf-core/metabat2/jgisummarizebamcontigdepths | Process | sort binning depth bam coverage de novo assembly | Depth computation per contig step of metabat2 |
| nf-core/metabat2/metabat2 | Process | sort binning depth bam coverage de novo assembly | Metagenome binning of contigs |
| nf-core/pydamage/analyze | Process | ancient DNA aDNA de novo assembly filtering damage deamination miscoding lesions C to T palaeogenomics archaeogenomics palaeogenetics archaeogenetics | Damage parameter estimation for ancient DNA |
| nf-core/pydamage/filter | Process | ancient DNA aDNA de novo assembly filtering damage deamination miscoding lesions C to T palaeogenomics archaeogenomics palaeogenetics archaeogenetics | Damage parameter estimation for ancient DNA |